Sfoglia per Autore
RING-PyMOL: residue interaction networks of structural ensembles and molecular dynamics
2023 Del Conte, A.; Monzon, A. M.; Clementel, D.; Camagni, G. F.; Minervini, G.; Tosatto, S. C. E.; Piovesan, D.
Combining Protein Conformational Diversity and Phylogenetic Information Using CoDNaS and CoDNaS-Q
2023 Escobedo, N.; Monzon, A. M.; Fornasari, M. S.; Palopoli, N.; Parisi, G.
The repetitive structure of DNA clamps: An overlooked protein tandem repeat
2023 Arrias, P. N.; Monzon, A. M.; Clementel, D.; Mozaffari, S.; Piovesan, D.; Kajava, A. V.; Tosatto, S. C. E.
MobiDB: 10 years of intrinsically disordered proteins
2023 Piovesan, Damiano; Del Conte, Alessio; Clementel, Damiano; Monzon, Alexander Miguel; Bevilacqua, Martina; Aspromonte, Maria Cristina; Iserte, Javier A; Orti, Fernando E; Marino-Buslje, Cristina; Tosatto, Silvio C E
CAID prediction portal: A comprehensive service for predicting intrinsic disorder and binding regions in proteins
2023 Del Conte, A.; Bouhraoua, A.; Mehdiabadi, M.; Clementel, D.; Monzon, A. M.; Tosatto, S. C. E.; Piovesan, D.
Critical assessment of protein intrinsic disorder prediction (CAID) - Results of round 2
2023 Del Conte, A.; Mehdiabadi, M.; Bouhraoua, A.; Monzon, A. M.; Tosatto, S. C. E.; Piovesan, D.
PED in 2024: improving the community deposition of structural ensembles for intrinsically disordered proteins
2023 Ghafouri, Hamidreza; Lazar, Tamas; Del Conte, Alessio; Tenorio Ku, Luiggi G; Tompa, Peter; Tosatto, Silvio C E; Monzon, Alexander Miguel
A STRP-ed definition of Structured Tandem Repeats in Proteins
2023 Monzon, Alexander Miguel; Arrías, Paula Nazarena; Elofsson, Arne; Mier, Pablo; Andrade-Navarro, Miguel A; Bevilacqua, Martina; Clementel, Damiano; Bateman, Alex; Hirsh, Layla; Fornasari, Maria Silvina; Parisi, Gustavo; Piovesan, Damiano; Kajava, Andrey V; Tosatto, Silvio C E
Intrinsic protein disorder and conditional folding in AlphaFoldDB
2022 Piovesan, Damiano; Monzon, Alexander Miguel; Tosatto, Silvio C E
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
2022 Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; Chemes, Lucía B; Pajkos, Mátyás; Lazar, Tamas; Peña-Díaz, Samuel; Santos, Jaime; Ács, Veronika; Farahi, Nazanin; Fichó, Erzsébet; Aspromonte, Maria Cristina; Bassot, Claudio; Chasapi, Anastasia; Davey, Norman E; Davidović, Radoslav; Dobson, Laszlo; Elofsson, Arne; Erdős, Gábor; Gaudet, Pascale; Giglio, Michelle; Glavina, Juliana; Iserte, Javier; Iglesias, Valentín; Kálmán, Zsófia; Lambrughi, Matteo; Leonardi, Emanuela; Longhi, Sonia; Macedo-Ribeiro, Sandra; Maiani, Emiliano; Marchetti, Julia; Marino-Buslje, Cristina; Mészáros, Attila; Monzon, Alexander Miguel; Minervini, Giovanni; Nadendla, Suvarna; Nilsson, Juliet F; Novotný, Marian; Ouzounis, Christos A; Palopoli, Nicolás; Papaleo, Elena; Pereira, Pedro José Barbosa; Pozzati, Gabriele; Promponas, Vasilis J; Pujols, Jordi; Rocha, Alma Carolina Sanchez; Salas, Martin; Sawicki, Luciana Rodriguez; Schad, Eva; Shenoy, Aditi; Szaniszló, Tamás; Tsirigos, Konstantinos D; Veljkovic, Nevena; Parisi, Gustavo; Ventura, Salvador; Dosztányi, Zsuzsanna; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
RING 3.0: fast generation of probabilistic residue interaction networks from structural ensembles
2022 Clementel, D.; Del Conte, A.; Monzon, A. M.; Camagni, G. F.; Minervini, G.; Piovesan, D.; Tosatto, S. C. E.
Databases for intrinsically disordered proteins
2022 Piovesan, Damiano; Monzon, Alexander Miguel; Quaglia, Federica; Tosatto, Silvio C. E.
FuzDB: a new phase in understanding fuzzy interactions
2022 Hatos, Andras; Monzon, Alexander Miguel; Tosatto, Silvio C E; Piovesan, Damiano; Fuxreiter, Monika
Molecular Determinants of Selectivity in Disordered Complexes May Shed Light on Specificity in Protein Condensates
2022 Monzon, A. M.; Piovesan, D.; Fuxreiter, M.
CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure
2022 Escobedo, Nahuel; Tunque Cahui, Ronaldo Romario; Caruso, Gastón; García Ríos, Emilio; Hirsh, Layla; Monzon, Alexander Miguel; Parisi, Gustavo; Palopoli, Nicolas
MobiDB: intrinsically disordered proteins in 2021
2021 Piovesan, Damiano; Necci, Marco; Escobedo, Nahuel; Monzon, Alexander Miguel; Hatos, András; Mičetić, Ivan; Quaglia, Federica; Paladin, Lisanna; Ramasamy, Pathmanaban; Dosztányi, Zsuzsanna; Vranken, Wim F; Davey, Norman E; Parisi, Gustavo; Fuxreiter, Monika; Tosatto, Silvio C E
RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures
2021 Paladin, Lisanna; Bevilacqua, Martina; Errigo, Sara; Piovesan, Damiano; Mičetić, Ivan; Necci, Marco; Monzon, Alexander Miguel; Fabre, Maria Laura; Lopez, Jose Luis; Nilsson, Juliet F; Rios, Javier; Menna, Pablo Lorenzano; Cabrera, Maia; Buitron, Martin Gonzalez; Kulik, Mariane Gonçalves; Fernandez-Alberti, Sebastian; Fornasari, Maria Silvina; Parisi, Gustavo; Lagares, Antonio; Hirsh, Layla; Andrade-Navarro, Miguel A; Kajava, Andrey V; Tosatto, Silvio C E
Intrinsically Disordered Protein Ensembles Shape Evolutionary Rates Revealing Conformational Patterns
2021 Palopoli, N.; Marchetti, J.; Monzon, A. M.; Zea, D. J.; Tosatto, S. C. E.; Fornasari, M. S.; Parisi, G.
PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
2021 Lazar, Tamas; Martínez-Pérez, Elizabeth; Quaglia, Federica; Hatos, András; Chemes, Lucía B; Iserte, Javier A; Méndez, Nicolás A; Garrone, Nicolás A; Saldaño, Tadeo E; Marchetti, Julia; Rueda, Ana Julia Velez; Bernadó, Pau; Blackledge, Martin; Cordeiro, Tiago N; Fagerberg, Eric; Forman-Kay, Julie D; Fornasari, Maria S; Gibson, Toby J; Gomes, Gregory-Neal W; Gradinaru, Claudiu C; Head-Gordon, Teresa; Jensen, Malene Ringkjøbing; Lemke, Edward A; Longhi, Sonia; Marino-Buslje, Cristina; Minervini, Giovanni; Mittag, Tanja; Monzon, Alexander Miguel; Pappu, Rohit V; Parisi, Gustavo; Ricard-Blum, Sylvie; Ruff, Kiersten M; Salladini, Edoardo; Skepö, Marie; Svergun, Dmitri; Vallet, Sylvain D; Varadi, Mihaly; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
Critical assessment of protein intrinsic disorder prediction
2021 Necci, M.; Piovesan, D.; Hoque, M. T.; Walsh, I.; Iqbal, S.; Vendruscolo, M.; Sormanni, P.; Wang, C.; Raimondi, D.; Sharma, R.; Zhou, Y.; Litfin, T.; Galzitskaya, O. V.; Lobanov, M. Y.; Vranken, W.; Wallner, B.; Mirabello, C.; Malhis, N.; Dosztanyi, Z.; Erdos, G.; Meszaros, B.; Gao, J.; Wang, K.; Hu, G.; Wu, Z.; Sharma, A.; Hanson, J.; Paliwal, K.; Callebaut, I.; Bitard-Feildel, T.; Orlando, G.; Peng, Z.; Xu, J.; Wang, S.; Jones, D. T.; Cozzetto, D.; Meng, F.; Yan, J.; Gsponer, J.; Cheng, J.; Wu, T.; Kurgan, L.; Promponas, V. J.; Tamana, S.; Marino-Buslje, C.; Martinez-Perez, E.; Chasapi, A.; Ouzounis, C.; Dunker, A. K.; Kajava, A. V.; Leclercq, J. Y.; Aykac-Fas, B.; Lambrughi, M.; Maiani, E.; Papaleo, E.; Chemes, L. B.; Alvarez, L.; Gonzalez-Foutel, N. S.; Iglesias, V.; Pujols, J.; Ventura, S.; Palopoli, N.; Benitez, G. I.; Parisi, G.; Bassot, C.; Elofsson, A.; Govindarajan, S.; Lamb, J.; Salvatore, M.; Hatos, A.; Monzon, A. M.; Bevilacqua, M.; Micetic, I.; Minervini, G.; Paladin, L.; Quaglia, F.; Leonardi, E.; Davey, N.; Horvath, T.; Kovacs, O. P.; Murvai, N.; Pancsa, R.; Schad, E.; Szabo, B.; Tantos, A.; Macedo-Ribeiro, S.; Manso, J. A.; Pereira, P. J. B.; Davidovic, R.; Veljkovic, N.; Hajdu-Soltesz, B.; Pajkos, M.; Szaniszlo, T.; Guharoy, M.; Lazar, T.; Macossay-Castillo, M.; Tompa, P.; Tosatto, S. C. E.
Legenda icone
- file ad accesso aperto
- file disponibili sulla rete interna
- file disponibili agli utenti autorizzati
- file disponibili solo agli amministratori
- file sotto embargo
- nessun file disponibile