BARUZZO, GIACOMO
BARUZZO, GIACOMO
Dipartimento di Ingegneria dell'Informazione - DEI
A comparison of Illumina and Ion Torrent platforms in a study of differential gene expression
2016 Lahens, Nicholas; Ricciotti, Emanuela; Smirnova, Olga; Toorens, Erik; Kim Eun, Ji; Baruzzo, Giacomo; Hayer, Katharina; Ganguly, Tapan; Schug, Jonathan; Grant, Gregory
A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression
2017 Lahens, Nicholas F; Ricciotti, Emanuela; Smirnova, Olga; Toorens, Erik; Kim, Eun Ji; Baruzzo, Giacomo; Hayer, Katharina E; Ganguly, Tapan; Schug, Jonathan; Grant, Gregory R
Analysis of differential cellular communication from single cell RNA-seq data with scSeqComm
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Analyze cellular communication from single cell RNA sequencing data with scSeqComm
2021 Baruzzo, Giacomo; Cesaro, Giulia; DI CAMILLO, Barbara
Benchmark Analysis of RNA-Seq Aligners
2016 Baruzzo, Giacomo; Hayer, Katharina; Kim Eun, Ji; DI CAMILLO, Barbara; Grant, Gregory
Benchmarking RNA-seq mapping strategies for paired-end reads
2014 Baruzzo, Giacomo; Finotello, Francesca; Lavezzo, Enrico; Agenese, Serafini; Provvedi, Roberta; Toppo, Stefano; Barzon, Luisa; Manganelli, Riccardo; DI CAMILLO, Barbara
Beware to ignore the rare: how imputing zero-values can improve the quality of 16S rRNA gene studies results
2022 Baruzzo, Giacomo; Patuzzi, Ilaria; Di Camillo, Barbara
CClens: effective and efficient differential cellular communication analysis of large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Cellular communication analysis of large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Cellular population dynamics shape the route to human pluripotency
2023 Panariello, Francesco; Gagliano, Onelia; Luni, Camilla; Grimaldi, Antonio; Angiolillo, Silvia; Qin, Wei; Manfredi, Anna; Annunziata, Patrizia; Slovin, Shaked; Vaccaro, Lorenzo; Riccardo, Sara; Bouche, Valentina; Dionisi, Manuela; Salvi, Marcello; Martewicz, Sebastian; Hu, Manli; Cui, Meihua; Stuart, Hannah; Laterza, Cecilia; Baruzzo, Giacomo; Schiebinger, Geoffrey; Di Camillo, Barbara; Cacchiarelli, Davide; Elvassore, Nicola
Comprehensive assessment of microbiome differential abundance tools
2021 Cappellato, M.; Baruzzo, G.; DI CAMILLO, Barbara
Comprehensive benchmarking of differential abundance methods in microbiome data
2023 Cappellato, Marco; Baruzzo, Giacomo; DI CAMILLO, Barbara
Comprehensive review of tumoral sample simulators: building a realistic gold standard for somatic variant calling validation
2023 Longhin, Francesca; Hazizaj, Enidia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Data-driven meta-simulation of realistic tumoral samples
2023 Longhin, Francesca; Hazizaj, Enidia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Development of computational models to infer and analyze cell-cell communication using scRNA-seq data
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Differential Abundance analysis of microbiome data: which tool and how to choose it?
2022 Cappellato, Marco; Baruzzo, Giacomo; DI CAMILLO, Barbara
Differential cellular communication analysis across multi-condition and multi-patient scRNA-seq data
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Differential cellular communication analysis from large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Differential cellular communication analysis from single cell RNA sequencing data with scSeqComm
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Evaluation of differential expression analysis methods for single-cell RNA-sequencing
2017 DAL MOLIN, Alessandra; Baruzzo, Giacomo; Patuzzi, Ilaria; DI CAMILLO, Barbara