When dealing with absolute quantification of the tracer kinetics in Positron Emission Tomography (PET), one of the most reliable family of methods are the physiologically-consistent compartmental ODE models [5]. In this work we introduce the kinetic neural Network (kNN), a novel technique for absolute quantification inspired by compartmental models and Neural Networks commonly used in Deep Learning. The ODE model’s explicit solution is computed symbolically with the Python package sympy [3], by using the Pade approximation of the exponential matrix [1]. The model is evaluated voxel-by- voxel with PET data and fitted using the Particle Swarm Optimization (PSO) [2, 4] technique. We applied this method on a set of PET images of the same subjects before and after an intervention. At last, we compared the derived parameter images by using Hostelling’s t-squared statistic to evaluate the regions of the brain affected by the treatment.
A Kinetic Neural Network Approach for Absolute Quantification and Change Detection in Positron Emission Tomography
Davide Poggiali
;Diego Cecchin;Stefano De Marchi
2019
Abstract
When dealing with absolute quantification of the tracer kinetics in Positron Emission Tomography (PET), one of the most reliable family of methods are the physiologically-consistent compartmental ODE models [5]. In this work we introduce the kinetic neural Network (kNN), a novel technique for absolute quantification inspired by compartmental models and Neural Networks commonly used in Deep Learning. The ODE model’s explicit solution is computed symbolically with the Python package sympy [3], by using the Pade approximation of the exponential matrix [1]. The model is evaluated voxel-by- voxel with PET data and fitted using the Particle Swarm Optimization (PSO) [2, 4] technique. We applied this method on a set of PET images of the same subjects before and after an intervention. At last, we compared the derived parameter images by using Hostelling’s t-squared statistic to evaluate the regions of the brain affected by the treatment.File | Dimensione | Formato | |
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