When dealing with absolute quantification of the tracer kinetics in Positron Emission Tomography (PET), one of the most reliable family of methods are the physiologically-consistent compartmental ODE models [5]. In this work we introduce the kinetic neural Network (kNN), a novel technique for absolute quantification inspired by compartmental models and Neural Networks commonly used in Deep Learning. The ODE model’s explicit solution is computed symbolically with the Python package sympy [3], by using the Pade approximation of the exponential matrix [1]. The model is evaluated voxel-by- voxel with PET data and fitted using the Particle Swarm Optimization (PSO) [2, 4] technique. We applied this method on a set of PET images of the same subjects before and after an intervention. At last, we compared the derived parameter images by using Hostelling’s t-squared statistic to evaluate the regions of the brain affected by the treatment.

A Kinetic Neural Network Approach for Absolute Quantification and Change Detection in Positron Emission Tomography

Davide Poggiali
;
Diego Cecchin;Stefano De Marchi
2019

Abstract

When dealing with absolute quantification of the tracer kinetics in Positron Emission Tomography (PET), one of the most reliable family of methods are the physiologically-consistent compartmental ODE models [5]. In this work we introduce the kinetic neural Network (kNN), a novel technique for absolute quantification inspired by compartmental models and Neural Networks commonly used in Deep Learning. The ODE model’s explicit solution is computed symbolically with the Python package sympy [3], by using the Pade approximation of the exponential matrix [1]. The model is evaluated voxel-by- voxel with PET data and fitted using the Particle Swarm Optimization (PSO) [2, 4] technique. We applied this method on a set of PET images of the same subjects before and after an intervention. At last, we compared the derived parameter images by using Hostelling’s t-squared statistic to evaluate the regions of the brain affected by the treatment.
2019
MASCOT 2018 Proceedings - 15th Meeting on Applied Scientific Computing and Tools, Grid generation, Approximation and Visualization
MASCOT 2018 - 15th Meeting on Applied Scientific Computing and Tools, Grid generation, Approximation and Visualization
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11577/3362968
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