CESARO, GIULIA
CESARO, GIULIA
Dipartimento di Ingegneria dell'Informazione - DEI
Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directions
2025 Cesaro, Giulia; Nagai, James Shiniti; Gnoato, Nicolò; Chiodi, Alice; Tussardi, Gaia; Klöker, Vanessa; Musumarra, Carmelo Vittorio; Mosca, Ettore; Costa, Ivan G; Di Camillo, Barbara; Calura, Enrica; Baruzzo, Giacomo
Development of computational methods to infer cell-cell communication using single-cell RNA sequencing data
2025 Cesaro, Giulia
Differential cellular communication inference framework for large-scale single-cell RNA-sequencing data
2025 Cesaro, Giulia; Baruzzo, Giacomo; Tussardi, Gaia; Di Camillo, Barbara
Intracellular signaling pathway reconstruction at single-cell resolution
2025 Cesaro, Giulia; Nagai, James; Baruzzo, Giacomo; Di Camillo, Barbara; Costa, Ivan
quickSparseM: a library for memory- and time-efficient computation on large, sparse matrices with application to omics data
2025 Baruzzo, Giacomo; Cesaro, Giulia; Camillo, Barbara Di
Sustainable computation on large, sparse omics matrices with quickSparseM
2025 Baruzzo, Giacomo; Cesaro, Giulia; Di Camillo, Barbara
Addressing the Biological Interpretation of High-Dimensional Cell-Cell Communication Data from Single Cell Transcriptomics Through an Interactive Web Application
2024 Tussardi, Gaia; Cesaro, Giulia; DI CAMILLO, Barbara; Baruzzo, Giacomo
Development of computational methods to infer cell-cell communication using single-cell RNA sequencing data
2024 Cesaro, Giulia
Interactive exploration of cell-cell communication results from single-cell RNA sequencing data through a webapp
2024 Tussardi, Gaia; Cesaro, Giulia; DI CAMILLO, Barbara; Baruzzo, Giacomo
Physically interacting cell sequencing in bone marrow fibrosis reveals distinct cellular niches in fibrosis
2024 Gleitz, Hélène F. E.; Shiniti Nagai, James; Ruiz, Mayra; Fuchs, Stijn; Snoeren, Inge; Boeree, Aurélie; Cesaro, Giulia; Kramann, Rafael; Costa, Ivan; Schneider, Rebekka K.
A statistical and network-based method to infer cellular communication from single-cell rna sequencing data
2023 Cesaro, Giulia
CClens: a cellular communication workflow for large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
CClens: effective and efficient differential cellular communication analysis of large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Cellular communication analysis of large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Differential cellular communication analysis from large-scale single-cell RNA sequencing data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Interactive and effective visualization framework for interpreting and exploring cellular communication data
2023 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Modeling the tumor microenvironment with a hybrid Multi-Agent Spatio-Temporal model fed with sequencing data
2023 Cesaro, Giulia; Milia, Mikele; Baruzzo, Giacomo; Alotto, Piergiorgio; Filipe da Cunha Carvalho de Miranda, Noel; Trajanoski, Zlatko; Finotello, Francesca; DI CAMILLO, Barbara
scSeqComm: a statistical and network-based framework to infer inter- and intra-cellular communication from single-cell RNA sequencing data
2023 Baruzzo, Giacomo; Cesaro, Giulia; DI CAMILLO, Barbara
Shedding light on cellular communication analysis: the present and the future
2023 Cesaro, Giulia; Nagai, James S.; Chiodi, Alice; Klöker, Vanessa; Gnoato, Nicolò; Mosca, Ettore; Costa, Ivan; Calura, Enrica; DI CAMILLO, Barbara; Baruzzo, Giacomo
Analysis of differential cellular communication from single cell RNA-seq data with scSeqComm
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara