Sfoglia per Autore
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources
2022 Varadi, Mihaly; Nair, Sreenath; Sillitoe, Ian; Tauriello, Gerardo; Anyango, Stephen; Bienert, Stefan; Borges, Clemente; Deshpande, Mandar; Green, Tim; Hassabis, Demis; Hatos, Andras; Hegedus, Tamas; Hekkelman, Maarten L; Joosten, Robbie; Jumper, John; Laydon, Agata; Molodenskiy, Dmitry; Piovesan, Damiano; Salladini, Edoardo; Salzberg, Steven L; Sommer, Markus J; Steinegger, Martin; Suhajda, Erzsebet; Svergun, Dmitri; Tenorio-Ku, Luiggi; Tosatto, Silvio; Tunyasuvunakool, Kathryn; Waterhouse, Andrew Mark; Žídek, Augustin; Schwede, Torsten; Orengo, Christine; Velankar, Sameer
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
2022 Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; Chemes, Lucía B; Pajkos, Mátyás; Lazar, Tamas; Peña-Díaz, Samuel; Santos, Jaime; Ács, Veronika; Farahi, Nazanin; Fichó, Erzsébet; Aspromonte, Maria Cristina; Bassot, Claudio; Chasapi, Anastasia; Davey, Norman E; Davidović, Radoslav; Dobson, Laszlo; Elofsson, Arne; Erdős, Gábor; Gaudet, Pascale; Giglio, Michelle; Glavina, Juliana; Iserte, Javier; Iglesias, Valentín; Kálmán, Zsófia; Lambrughi, Matteo; Leonardi, Emanuela; Longhi, Sonia; Macedo-Ribeiro, Sandra; Maiani, Emiliano; Marchetti, Julia; Marino-Buslje, Cristina; Mészáros, Attila; Monzon, Alexander Miguel; Minervini, Giovanni; Nadendla, Suvarna; Nilsson, Juliet F; Novotný, Marian; Ouzounis, Christos A; Palopoli, Nicolás; Papaleo, Elena; Pereira, Pedro José Barbosa; Pozzati, Gabriele; Promponas, Vasilis J; Pujols, Jordi; Rocha, Alma Carolina Sanchez; Salas, Martin; Sawicki, Luciana Rodriguez; Schad, Eva; Shenoy, Aditi; Szaniszló, Tamás; Tsirigos, Konstantinos D; Veljkovic, Nevena; Parisi, Gustavo; Ventura, Salvador; Dosztányi, Zsuzsanna; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
RING 3.0: fast generation of probabilistic residue interaction networks from structural ensembles
2022 Clementel, D.; Del Conte, A.; Monzon, A. M.; Camagni, G. F.; Minervini, G.; Piovesan, D.; Tosatto, S. C. E.
ECO: the Evidence and Conclusion Ontology, an update for 2022
2022 Nadendla, Suvarna; Jackson, Rebecca; Munro, James; Quaglia, Federica; Mészáros, Bálint; Olley, Dustin; Hobbs, Elizabeth T; Goralski, Stephen M; Chibucos, Marcus; Mungall, Christopher John; Tosatto, Silvio C E; Erill, Ivan; Giglio, Michelle G
Databases for intrinsically disordered proteins
2022 Piovesan, Damiano; Monzon, Alexander Miguel; Quaglia, Federica; Tosatto, Silvio C. E.
FuzDB: a new phase in understanding fuzzy interactions
2022 Hatos, Andras; Monzon, Alexander Miguel; Tosatto, Silvio C E; Piovesan, Damiano; Fuxreiter, Monika
Mocafe: a comprehensive Python library for simulating cancer development with Phase Field Models
2022 Pradelli, Franco; Minervini, Giovanni; Tosatto, Silvio C E
Characterization of the pVHL Interactome in Human Testis Using High-Throughput Library Screening
2022 Falconieri, A.; Minervini, G.; Quaglia, F.; Sartori, G.; Tosatto, S. C. E.
FuzDrop on AlphaFold: visualizing the sequence-dependent propensity of liquid-liquid phase separation and aggregation of proteins
2022 Hatos, Andras; Tosatto, Silvio C E; Vendruscolo, Michele; Fuxreiter, Monika
SARS-CoV-2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion
2022 Quaglia, F.; Salladini, E.; Carraro, M.; Minervini, G.; Tosatto, S. C. E.; Le Mercier, P.
Intrinsic protein disorder and conditional folding in AlphaFoldDB
2022 Piovesan, Damiano; Monzon, Alexander Miguel; Tosatto, Silvio C E
Exploring Manually Curated Annotations of Intrinsically Disordered Proteins with DisProt
2022 Quaglia, Federica; Hatos, András; Salladini, Edoardo; Piovesan, Damiano; Tosatto, Silvio C E
PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins
2021 Lazar, Tamas; Martínez-Pérez, Elizabeth; Quaglia, Federica; Hatos, András; Chemes, Lucía B; Iserte, Javier A; Méndez, Nicolás A; Garrone, Nicolás A; Saldaño, Tadeo E; Marchetti, Julia; Rueda, Ana Julia Velez; Bernadó, Pau; Blackledge, Martin; Cordeiro, Tiago N; Fagerberg, Eric; Forman-Kay, Julie D; Fornasari, Maria S; Gibson, Toby J; Gomes, Gregory-Neal W; Gradinaru, Claudiu C; Head-Gordon, Teresa; Jensen, Malene Ringkjøbing; Lemke, Edward A; Longhi, Sonia; Marino-Buslje, Cristina; Minervini, Giovanni; Mittag, Tanja; Monzon, Alexander Miguel; Pappu, Rohit V; Parisi, Gustavo; Ricard-Blum, Sylvie; Ruff, Kiersten M; Salladini, Edoardo; Skepö, Marie; Svergun, Dmitri; Vallet, Sylvain D; Varadi, Mihaly; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
The InterPro protein families and domains database: 20 years on
2021 Blum, Matthias; Chang, Hsin-Yu; Chuguransky, Sara; Grego, Tiago; Kandasaamy, Swaathi; Mitchell, Alex; Nuka, Gift; Paysan-Lafosse, Typhaine; Qureshi, Matloob; Raj, Shriya; Richardson, Lorna; Salazar, Gustavo A; Williams, Lowri; Bork, Peer; Bridge, Alan; Gough, Julian; Haft, Daniel H; Letunic, Ivica; Marchler-Bauer, Aron; Mi, Huaiyu; Natale, Darren A; Necci, Marco; Orengo, Christine A; Pandurangan, Arun P; Rivoire, Catherine; Sigrist, Christian J A; Sillitoe, Ian; Thanki, Narmada; Thomas, Paul D; Tosatto, Silvio C E; Wu, Cathy H; Bateman, Alex; Finn, Robert D
FLIPPER: Predicting and Characterizing Linear Interacting Peptides in the Protein Data Bank
2021 Monzon, A. M.; Bonato, P.; Necci, M.; Tosatto, S. C. E.; Piovesan, D.
The MemMoRF database for recognizing disordered protein regions interacting with cellular membranes
2021 Csizmadia, Georgina; Erdős, Gábor; Tordai, Hedvig; Padányi, Rita; Tosatto, Silvio; Dosztányi, Zsuzsanna; Hegedűs, Tamás
MobiDB: intrinsically disordered proteins in 2021
2021 Piovesan, Damiano; Necci, Marco; Escobedo, Nahuel; Monzon, Alexander Miguel; Hatos, András; Mičetić, Ivan; Quaglia, Federica; Paladin, Lisanna; Ramasamy, Pathmanaban; Dosztányi, Zsuzsanna; Vranken, Wim F; Davey, Norman E; Parisi, Gustavo; Fuxreiter, Monika; Tosatto, Silvio C E
The f subunit of human ATP synthase is essential for normal mitochondrial morphology and permeability transition
2021 Galber, C.; Minervini, G.; Cannino, G.; Boldrin, F.; Petronilli, V.; Tosatto, S.; Lippe, G.; Giorgio, V.
ProSeqViewer: an interactive, responsive and efficient TypeScript library for visualization of sequences and alignments in web applications
2021 Bevilacqua, Martina; Paladin, Lisanna; Tosatto, Silvio C E; Piovesan, Damiano
Neurocognitive assessment and DNA sequencing expand the phenotype and genotype spectrum of Alström syndrome
2021 Dassie, Francesca; Silvia, Benavides‐varela; Milan, Gabriella; Favaretto, Francesca; Callus, Edward; Cagnin, Stefano; Reggiani, Francesco; Minervini, Giovanni; Tosatto, Silvio; Vettor, Roberto; Semenza, Carlo; Maffei, Pietro
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