LAVEZZO, ENRICO
LAVEZZO, ENRICO
Dipartimento di Medicina Molecolare - DMM
A functional and structural comparative analysis of Large Tumor Antigens reveals evolution of different importin α-dependent nuclear localization signals
2023 Cross, Emily M; Akbari, Nasim; Ghassabian, Hanieh; Hoad, Mikayla; Pavan, Silvia; Ariawan, Daryl; Donnelly, Camilla M; Lavezzo, Enrico; Petersen, Gayle F; Forwood, Jade K; Alvisi, Gualtiero
A large-scale evaluation of computational protein function prediction
2013 Predrag, Radivojac; Clark, Wyatt T.; Tal Ronnen Oron, ; Schnoes, Alexandra M.; Tobias, Wittkop; Artem, Sokolov; Kiley, Graim; Christopher, Funk; Karin, Verspoor; Asa Ben Hur, ; Gaurav, Pandey; Yunes, Jeffrey M.; Talwalkar, Ameet S.; Susanna, Repo; Souza, Michael L.; Piovesan, Damiano; Rita, Casadio; Zheng, Wang; Jianlin, Cheng; Hai, Fang; Julian, Gough; Patrik, Koskinen; Petri, Törönen; Jussi Nokso Koivisto, ; Liisa, Holm; Domenico, Cozzetto; Buchan, Daniel W. A.; Kevin, Bryson; Jones, David T.; Bhakti, Limaye; Harshal, Inamdar; Avik, Datta; Manjari, Sunitha K.; Rajendra, Joshi; Meghana, Chitale; Daisuke, Kihara; Lisewski, Andreas M.; Serkan, Erdin; Eric, Venner; Olivier, Lichtarge; Robert, Rentzsch; Haixuan, Yang; Romero, Alfonso E.; Prajwal, Bhat; Alberto, Paccanaro; Tobias, Hamp; Rebecca, Kaßner; Stefan, Seemayer; Esmeralda, Vicedo; Christian, Schaefer; Dominik, Achten; Florian, Auer; Ariane, Boehm; Tatjana, Braun; Maximilian, Hecht; Mark, Heron; Peter, Hönigschmid; Hopf, Thomas A.; Stefanie, Kaufmann; Michael, Kiening; Denis, Krompass; Cedric, Landerer; Yannick, Mahlich; Manfred, Roos; Jari, Björne; Tapio, Salakoski; Andrew, Wong; Hagit, Shatkay; Fanny, Gatzmann; Ingolf, Sommer; Wass, Mark N.; Sternberg, Michael J. E.; Nives, Škunca; Fran, Supek; Matko, Bošnjak; Panče, Panov; Sašo, Džeroski; Tomislav, Šmuc; Kourmpetis, Yiannis A. I.; van Dijk, Aalt D. J.; ter Braak, Cajo J. F.; Yuanpeng, Zhou; Qingtian, Gong; Xinran, Dong; Weidong, Tian; Falda, Marco; Paolo, Fontana; Lavezzo, Enrico; DI CAMILLO, Barbara; Toppo, Stefano; Liang, Lan; Nemanja, Djuric; Yuhong, Guo; Slobodan, Vucetic; Amos, Bairoch; Michal, Linial; Babbitt, Patricia C.; Brenner, Steven E.; Christine, Orengo; Burkhard, Rost; Mooney, Sean D.; Iddo, Friedberg
A Method to Reveal and Handle Heterogeneities and Inconsistencies in Gene Ontology Annotation.
2011 Facchinetti, Andrea; Sanavia, Tiziana; DI CAMILLO, Barbara; Lavezzo, Enrico; Fontana, P; Toppo, Stefano
A strategy to reduce technical variability and bias in RNA sequencing data.
2013 Finotello, Francesca; Lavezzo, Enrico; Barzon, Luisa; Mazzon, PAOLO EMILIO; P., Fontana; Toppo, Stefano; DI CAMILLO, Barbara
Accurate Human Papillomavirus Genotyping by 454 Pyrosequencing
2013 Militello, Valentina; Lavezzo, Enrico; Costanzi, Giulia; Franchin, Elisa; DI CAMILLO, Barbara; Toppo, Stefano; Palu', Giorgio; Barzon, Luisa
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
2016 Jiang, Yuxiang; Oron, Tal Ronnen; Clark, Wyatt T.; Bankapur, Asma R.; D'Andrea, Daniel; Lepore, Rosalba; Funk, Christopher S.; Kahanda, Indika; Verspoor, Karin M.; Ben Hur, Asa; Koo, Da Chen Emily; Penfold Brown, Duncan; Shasha, Dennis; Youngs, Noah; Bonneau, Richard; Lin, Alexandra; Sahraeian, Sayed M. E.; Martelli, Pier Luigi; Profiti, Giuseppe; Casadio, Rita; Cao, Renzhi; Zhong, Zhaolong; Cheng, Jianlin; Altenhoff, Adrian; Skunca, Nives; Dessimoz, Christophe; Dogan, Tunca; Hakala, Kai; Kaewphan, Suwisa; Mehryary, Farrokh; Salakoski, Tapio; Ginter, Filip; Fang, Hai; Smithers, Ben; Oates, Matt; Gough, Julian; Törönen, Petri; Koskinen, Patrik; Holm, Liisa; Chen, Ching Tai; Hsu, Wen Lian; Bryson, Kevin; Cozzetto, Domenico; Minneci, Federico; Jones, David T.; Chapman, Samuel; Bkc, Dukka; Khan, Ishita K.; Kihara, Daisuke; Ofer, Dan; Rappoport, Nadav; Stern, Amos; Cibrian Uhalte, Elena; Denny, Paul; Foulger, Rebecca E.; Hieta, Reija; Legge, Duncan; Lovering, Ruth C.; Magrane, Michele; Melidoni, Anna N.; Mutowo Meullenet, Prudence; Pichler, Klemens; Shypitsyna, Aleksandra; Li, Biao; Zakeri, Pooya; Elshal, Sarah; Tranchevent, Léon Charles; Das, Sayoni; Dawson, Natalie L.; Lee, David; Lees, Jonathan G.; Sillitoe, Ian; Bhat, Prajwal; Nepusz, Tamás; Romero, Alfonso E.; Sasidharan, Rajkumar; Yang, Haixuan; Paccanaro, Alberto; Gillis, Jesse; Sedeño Cortés, Adriana E.; Pavlidis, Paul; Feng, Shou; Cejuela, Juan M.; Goldberg, Tatyana; Hamp, Tobias; Richter, Lothar; Salamov, Asaf; Gabaldon, Toni; Marcet Houben, Marina; Supek, Fran; Gong, Qingtian; Ning, Wei; Zhou, Yuanpeng; Tian, Weidong; Falda, Marco; Fontana, Paolo; Lavezzo, Enrico; Toppo, Stefano; Ferrari, Carlo; Giollo, Manuel; Piovesan, Damiano; Tosatto, Silvio; del Pozo, Angela; Fernández, José M.; Maietta, Paolo; Valencia, Alfonso; Tress, Michael L.; Benso, Alfredo; Di Carlo, Stefano; Politano, Gianfranco; Savino, Alessandro; Rehman, Hafeez Ur; Re, Matteo; Mesiti, Marco; Valentini, Giorgio; Bargsten, Joachim W.; van Dijk, Aalt D. J.; Gemovic, Branislava; Glisic, Sanja; Perovic, Vladmir; Veljkovic, Veljko; Veljkovic, Nevena; Almeida e. Silva, Danillo C.; Vencio, Ricardo Z. N.; Sharan, Malvika; Vogel, Jörg; Kansakar, Lakesh; Zhang, Shanshan; Vucetic, Slobodan; Wang, Zheng; Sternberg, Michael J. E.; Wass, Mark N.; Huntley, Rachael P.; Martin, Maria J.; O'Donovan, Claire; Robinson, Peter N.; Moreau, Yves; Tramontano, Anna; Babbitt, Patricia C.; Brenner, Steven E.; Linial, Michal; Orengo, Christine A.; Rost, Burkhard; Greene, Casey S.; Mooney, Sean D.; Friedberg, Iddo; Radivojac, Predrag
An Overview of Protein Function Prediction Methods: A Deep Learning Perspective
2023 Ispano, E.; Bianca, F.; Lavezzo, E.; Toppo, S.
ANALISI DEI PROFILI DI ESPRESSIONE DEI MICRORNA NELLA PROGRESSIONE DELL'EPATOCARCINOMA E SVILUPPO DI METODI BIOINFORMATICI PER LA PREDIZIONE DEI GENI TARGET
2010 Lavezzo, Enrico
Analysis of Human Cytomegalovirus-encoded microRNAs and cellular microRNAs during infection
2010 Trevisan, Marta; Lavezzo, Enrico; Sinigaglia, A; Toppo, S; DI CAMILLO, Barbara; Barzon, Luisa; Palù, G.
Antimicrobial Treatment and Containment Measures for an Extremely Drug-Resistant Klebsiella pneumoniae ST101 Isolate Carrying pKPN101-IT, a Novel Fully Sequenced blaKPC-2 Plasmid
2012 Frasson, Ilaria; Lavezzo, Enrico; Franchin, Elisa; Toppo, Stefano; Barzon, Luisa; A., Cavallaro; Richter, Sara; Palu', Giorgio
Applications of next-generation sequencing technologies to diagnostic virology.
2011 Barzon, Luisa; Lavezzo, Enrico; Militello, Valentina; Toppo, Stefano; Palu', Giorgio
Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms.
2012 Falda, Marco; Toppo, Stefano; Pescarolo, Alessandro; Lavezzo, Enrico; DI CAMILLO, Barbara; Facchinetti, Andrea; Cilia, E; Velasco, R; Fontana, P.
Author Correction: SARS-CoV-2 antibody dynamics and transmission from community-wide serological testing in the Italian municipality of Vo’ (Nature Communications, (2021), 12, 1, (4383), 10.1038/s41467-021-24622-7)
2021 Dorigatti, I.; Lavezzo, E.; Manuto, L.; Ciavarella, C.; Pacenti, M.; Boldrin, C.; Cattai, M.; Saluzzo, F.; Franchin, E.; Del Vecchio, C.; Caldart, F.; Castelli, G.; Nicoletti, M.; Nieddu, E.; Salvadoretti, E.; Labella, B.; Fava, L.; Guglielmo, S.; Fascina, M.; Grazioli, M.; Alvisi, G.; Vanuzzo, M. C.; Zupo, T.; Calandrin, R.; Lisi, V.; Rossi, L.; Castagliuolo, I.; Merigliano, S.; Unwin, H. J. T.; Plebani, M.; Padoan, A.; Brazzale, A. R.; Toppo, S.; Ferguson, N. M.; Donnelly, C. A.; Crisanti, A.
Author Correction: Suppression of a SARS-CoV-2 outbreak in the Italian municipality of Vo’ (Nature, (2020), 584, 7821, (425-429), 10.1038/s41586-020-2488-1)
2021 Lavezzo, E.; Franchin, E.; Ciavarella, C.; Cuomo-Dannenburg, G.; Barzon, L.; Del Vecchio, C.; Rossi, L.; Manganelli, R.; Loregian, A.; Navarin, N.; Abate, D.; Sciro, M.; Merigliano, S.; De Canale, E.; Vanuzzo, M. C.; Besutti, V.; Saluzzo, F.; Onelia, F.; Pacenti, M.; Parisi, S. G.; Carretta, G.; Donato, D.; Flor, L.; Cocchio, S.; Masi, G.; Sperduti, A.; Cattarino, L.; Salvador, R.; Nicoletti, M.; Caldart, F.; Castelli, G.; Nieddu, E.; Labella, B.; Fava, L.; Drigo, M.; Gaythorpe, K. A. M.; Ainslie, K. E. C.; Baguelin, M.; Bhatt, S.; Boonyasiri, A.; Boyd, O.; Coupland, H. L.; Cucunuba, Z.; Djafaara, B. A.; van Elsland, S. L.; Fitzjohn, R.; Flaxman, S.; Green, W. D.; Hallett, T.; Hamlet, A.; Haw, D.; Imai, N.; Jeffrey, B.; Knock, E.; Laydon, D. J.; Mellan, T.; Mishra, S.; Nedjati-Gilani, G.; Nouvellet, P.; Okell, L. C.; Parag, K. V.; Riley, S.; Thompson, H. A.; Unwin, H. J. T.; Verity, R.; Vollmer, M. A. C.; Walker, P. G. T.; Walters, C. E.; Wang, H.; Wang, Y.; Watson, O. J.; Whittaker, C.; Whittles, L. K.; Xi, X.; Brazzale, A. R.; Toppo, S.; Trevisan, M.; Baldo, V.; Donnelly, C. A.; Ferguson, N. M.; Dorigatti, I.; Crisanti, A.
Benchmarking RNA-seq mapping strategies for paired-end reads
2014 Baruzzo, Giacomo; Finotello, Francesca; Lavezzo, Enrico; Agenese, Serafini; Provvedi, Roberta; Toppo, Stefano; Barzon, Luisa; Manganelli, Riccardo; DI CAMILLO, Barbara
Can we go beyond sequence similarity to predict protein function?
2012 Fontana, P; Sanavia, Tiziana; Facchinetti, Andrea; Lavezzo, Enrico; Falda, Marco; Cavalieri, D; DI CAMILLO, Barbara; Toppo, Stefano
Changes in microRNA expression during disease progression in patients with chronic viral hepatitis
2015 Sinigaglia, Alessandro; Lavezzo, Enrico; Trevisan, Marta; Sanavia, Tiziana; DI CAMILLO, Barbara; Peta, Elektra; Scarpa, Melania; Castagliuolo, Ignazio; Guido, Maria; Sarcognato, Samantha; Cappellesso, Rocco; Fassina, Ambrogio; Cardin, Romilda; Farinati, Fabio; Palu', Giorgio; Barzon, Luisa
Characterization and reduction of biases in RNA sequencing data
2012 Finotello, Francesca; Lavezzo, Enrico; Barzon, Luisa; P., Fontana; Toppo, Stefano; DI CAMILLO, Barbara
Characterization of a novel complex BRAF mutation in a follicular variant papillary thyroid carcinoma
2008 Barzon, Luisa; Masi, Giulia; MERANTE BOSCHIN, Isabella; Lavezzo, Enrico; Pacenti, M; Ide, Ec; Toniato, Antonio; Toppo, Stefano; Palu', Giorgio; Pelizzo, MARIA ROSA
Characterization of human West Nile Virus strain isolated in Northern Italy
2013 Barzon, Luisa; Pacenti, Monia; Franchin, Elisa; Squarzon, Laura; Sinigaglia, Alessandro; Asnicar, Samuele; Lavezzo, Enrico; Toppo, Stefano; Corbach Soehle, S; Castagliuolo, Ignazio; Masi, Giulia; Ulbert, S; Cattai, Margherita; Cusinato, Riccardo; Palu', Giorgio