Sfoglia per Autore
Analysis of differential cellular communication from single cell RNA-seq data with scSeqComm
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Simulate personalized tumor microenvironment evolution through a hybrid Multi-Agent Spatio-Temporal model informed by sequencing data
2022 Cesaro, Giulia; Milia, Mikele; Baruzzo, Giacomo; Alotto, Piergiorgio; Filipe da Cunha Carvalho de Miranda, Noel; Trajanoski, Zlatko; Finotello, Francesca; DI CAMILLO, Barbara
Differential cellular communication analysis from single cell RNA sequencing data with scSeqComm
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Differential Abundance analysis of microbiome data: which tool and how to choose it?
2022 Cappellato, Marco; Baruzzo, Giacomo; DI CAMILLO, Barbara
Simulation of ground truth interaction networks from microbial community model
2022 Rossato, Ada; Cappellato, Marco; Nikoloska, Nora; Baruzzo, Giacomo; DI CAMILLO, Barbara
Somatic read simulators: how to build a realistic gold standard using data from well-annotated cancer databases
2022 Longhin, Francesca; Hazizaj, Enidia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Investigating differential abundance methods in microbiome data: A benchmark study
2022 Cappellato, Marco; Baruzzo, Giacomo; Di Camillo, Barbara
Differential cellular communication analysis across multi-condition and multi-patient scRNA-seq data
2022 Cesaro, Giulia; Baruzzo, Giacomo; DI CAMILLO, Barbara
Simulate tumor microenvironment evolution from sequencing data through a hybrid Multi-Agent Spatio-Temporal model
2022 Cesaro, Giulia; Milia, Mikele; Baruzzo, Giacomo; Alotto, Piergiorgio; Filipe da Cunha Carvalho de Miranda, Noel; Trajanoski, Zlatko; Finotello, Francesca; DI CAMILLO, Barbara; Finco, Giovanni; Morandini, Francesco; Lazzarini, Alessio
Simulation of ground truth interaction networks from microbial community model
2022 Rossato, Ada; Cappellato, Marco; Baruzzo, Giacomo; DI CAMILLO, Barbara
MAST: a hybrid Multi-Agent Spatio-Temporal model of tumor microenvironment informed using a data-driven approach
2022 Cesaro, Giulia; Milia, Mikele; Baruzzo, Giacomo; Finco, Giovanni; Morandini, Francesco; Lazzarini, Alessio; Alotto, Piergiorgio; da Cunha Carvalho de Miranda, Noel Filipe; Trajanoski, Zlatko; Finotello, Francesca; Di Camillo, Barbara
Identify, quantify and characterize cellular communication from single cell RNA sequencing data with scSeqComm
2022 Baruzzo, Giacomo; Cesaro, Giulia; Di Camillo, Barbara
Beware to ignore the rare: how imputing zero-values can improve the quality of 16S rRNA gene studies results
2022 Baruzzo, Giacomo; Patuzzi, Ilaria; Di Camillo, Barbara
Investigating differential abundance methods in microbiome data: a benchmark study
2021 Cappellato, Marco; Baruzzo, Giacomo; DI CAMILLO, Barbara
ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy
2021 Tangaro, Marco; Defazio, Giuseppe; Fosso, Bruno; Licciulli, Vito Flavio; Grillo, Giorgio; Donvito, Giacinto; Lavezzo, Enrico; Baruzzo, Giacomo; Pesole, Graziano; Santamaria, Monica
Analyze cellular communication from single cell RNA sequencing data with scSeqComm
2021 Baruzzo, Giacomo; Cesaro, Giulia; DI CAMILLO, Barbara
scSeqComm: a bioinformatic tool to identify, quantify and characterize cellular communication from single cell RNA sequencing data
2021 Baruzzo, Giacomo; Cesaro, Giulia; DI CAMILLO, Barbara
Comprehensive assessment of microbiome differential abundance tools
2021 Cappellato, M.; Baruzzo, G.; DI CAMILLO, Barbara
Nilotinib-induced bone marrow CD34+/lin-Ph+ cells early clearance in newly diagnosed CP-Chronic Myeloid Leukemia: Final report of the PhilosoPhi34 study
2021 Pungolino, Ester; D'Adda, Mariella; De Canal, Gabriella; Trojani, Alessandra; Perego, Alessandra; Elena, Chiara; Lunghi, Francesca; Turrini, Mauro; Borin, Lorenza; Iurlo, Alessandra; Latargia, Maria Luisa; Carraro, Maria Cristina; Spina, Francesco; Artale, Salvatore; Anghilieri, Michela; Molteni, Alfredo; Caramella, Marianna; Baruzzo, Giacomo; Nichelatti, Michele; Di Camillo, Barbara; Cairoli, Roberto
Modeling Microbial Community Networks: Methods and Tools
2021 Cappellato, Marco; Baruzzo, Giacomo; Patuzzi, Ilaria; DI CAMILLO, Barbara
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