Sfoglia per Autore
Full genome sequence-based comparative study of wild-type and vaccine strains of infectious laryngotracheitis virus from Italy
2016 Piccirillo, Alessandra; Lavezzo, Enrico; Niero, Giulia; Moreno, A.; Massi, P.; Franchin, Elisa; Toppo, Stefano; Salata, Cristiano; Palu', Giorgio
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
2016 Jiang, Yuxiang; Oron, Tal Ronnen; Clark, Wyatt T.; Bankapur, Asma R.; D'Andrea, Daniel; Lepore, Rosalba; Funk, Christopher S.; Kahanda, Indika; Verspoor, Karin M.; Ben Hur, Asa; Koo, Da Chen Emily; Penfold Brown, Duncan; Shasha, Dennis; Youngs, Noah; Bonneau, Richard; Lin, Alexandra; Sahraeian, Sayed M. E.; Martelli, Pier Luigi; Profiti, Giuseppe; Casadio, Rita; Cao, Renzhi; Zhong, Zhaolong; Cheng, Jianlin; Altenhoff, Adrian; Skunca, Nives; Dessimoz, Christophe; Dogan, Tunca; Hakala, Kai; Kaewphan, Suwisa; Mehryary, Farrokh; Salakoski, Tapio; Ginter, Filip; Fang, Hai; Smithers, Ben; Oates, Matt; Gough, Julian; Törönen, Petri; Koskinen, Patrik; Holm, Liisa; Chen, Ching Tai; Hsu, Wen Lian; Bryson, Kevin; Cozzetto, Domenico; Minneci, Federico; Jones, David T.; Chapman, Samuel; Bkc, Dukka; Khan, Ishita K.; Kihara, Daisuke; Ofer, Dan; Rappoport, Nadav; Stern, Amos; Cibrian Uhalte, Elena; Denny, Paul; Foulger, Rebecca E.; Hieta, Reija; Legge, Duncan; Lovering, Ruth C.; Magrane, Michele; Melidoni, Anna N.; Mutowo Meullenet, Prudence; Pichler, Klemens; Shypitsyna, Aleksandra; Li, Biao; Zakeri, Pooya; Elshal, Sarah; Tranchevent, Léon Charles; Das, Sayoni; Dawson, Natalie L.; Lee, David; Lees, Jonathan G.; Sillitoe, Ian; Bhat, Prajwal; Nepusz, Tamás; Romero, Alfonso E.; Sasidharan, Rajkumar; Yang, Haixuan; Paccanaro, Alberto; Gillis, Jesse; Sedeño Cortés, Adriana E.; Pavlidis, Paul; Feng, Shou; Cejuela, Juan M.; Goldberg, Tatyana; Hamp, Tobias; Richter, Lothar; Salamov, Asaf; Gabaldon, Toni; Marcet Houben, Marina; Supek, Fran; Gong, Qingtian; Ning, Wei; Zhou, Yuanpeng; Tian, Weidong; Falda, Marco; Fontana, Paolo; Lavezzo, Enrico; Toppo, Stefano; Ferrari, Carlo; Giollo, Manuel; Piovesan, Damiano; Tosatto, Silvio; del Pozo, Angela; Fernández, José M.; Maietta, Paolo; Valencia, Alfonso; Tress, Michael L.; Benso, Alfredo; Di Carlo, Stefano; Politano, Gianfranco; Savino, Alessandro; Rehman, Hafeez Ur; Re, Matteo; Mesiti, Marco; Valentini, Giorgio; Bargsten, Joachim W.; van Dijk, Aalt D. J.; Gemovic, Branislava; Glisic, Sanja; Perovic, Vladmir; Veljkovic, Veljko; Veljkovic, Nevena; Almeida e. Silva, Danillo C.; Vencio, Ricardo Z. N.; Sharan, Malvika; Vogel, Jörg; Kansakar, Lakesh; Zhang, Shanshan; Vucetic, Slobodan; Wang, Zheng; Sternberg, Michael J. E.; Wass, Mark N.; Huntley, Rachael P.; Martin, Maria J.; O'Donovan, Claire; Robinson, Peter N.; Moreau, Yves; Tramontano, Anna; Babbitt, Patricia C.; Brenner, Steven E.; Linial, Michal; Orengo, Christine A.; Rost, Burkhard; Greene, Casey S.; Mooney, Sean D.; Friedberg, Iddo; Radivojac, Predrag
Infection dynamics in a traveller with persistent shedding of Zika virus RNA in semen for six months after returning from Haiti to Italy, January 2016
2016 Barzon, Luisa; Pacenti, Monia; Franchin, Elisa; Lavezzo, Enrico; Trevisan, Marta; Sgarabotto, D.; Palu', Giorgio
High-throughput sequencing of avian Infectious Laryngotracheitis virus (ILTV).
2015 Piccirillo, Alessandra; Lavezzo, Enrico; Niero, Giulia; Moreno, A.; Massi, P.; Franchin, Elisa; Toppo, Stefano; Salata, Cristiano; Palu', Giorgio
Phylogenetic characterization of Central/Southern European lineage 2 West Nile virus: Analysis of human outbreaks in Italy and Greece, 2013-2014
2015 Barzon, Luisa; Papa, A.; Lavezzo, Enrico; Franchin, Elisa; Pacenti, Monia; Sinigaglia, Alessandro; Masi, Giulia; Trevisan, Marta; Squarzon, Laura; Toppo, Stefano; Papadopoulou, E.; Nowotny, N.; Ulbert, S.; Piralla, A.; Rovida, F.; Baldanti, F.; Percivalle, E.; Palu', Giorgio
Changes in microRNA expression during disease progression in patients with chronic viral hepatitis
2015 Sinigaglia, Alessandro; Lavezzo, Enrico; Trevisan, Marta; Sanavia, Tiziana; DI CAMILLO, Barbara; Peta, Elektra; Scarpa, Melania; Castagliuolo, Ignazio; Guido, Maria; Sarcognato, Samantha; Cappellesso, Rocco; Fassina, Ambrogio; Cardin, Romilda; Farinati, Fabio; Palu', Giorgio; Barzon, Luisa
keeSeek: searching distant non-existing words in genomes for PCR-based applications.
2014 Falda, Marco; Fontana, P; Barzon, Luisa; Toppo, Stefano; Lavezzo, Enrico
Four year longitudinal study of Mycobacterium tuberculosis complex isolates in a region of North-Eastern Italy.
2014 Fallico, Loredana; Couvin, D; Peracchi, M; Pascarella, M; Franchin, Elisa; Lavezzo, Enrico; Rassu, M; Manganelli, Riccardo; Rastogi, N; Palu', Giorgio
Colonic microbiota and gene methylation in colonic carcinogenesis
2014 Scarpa, M.; Barzon, Luisa; Costanzi, G.; Lavezzo, Enrico; Finotello, Francesca; Erroi, F.; Dallagnese, L.; Basato, S.; Brun, Paola; Toppo, S.; DI CAMILLO, Barbara; Castoro, C.; Castagliuolo, I.
Reverse engineering the human microbiota
2014 Finotello, Francesca; Lavezzo, Enrico; Toppo, Stefano; Barzon, Luisa; DI CAMILLO, Barbara
Benchmarking RNA-seq mapping strategies for paired-end reads
2014 Baruzzo, Giacomo; Finotello, Francesca; Lavezzo, Enrico; Agenese, Serafini; Provvedi, Roberta; Toppo, Stefano; Barzon, Luisa; Manganelli, Riccardo; DI CAMILLO, Barbara
Modelling differences and interactions in the human microbiota
2014 Finotello, Francesca; Lavezzo, Enrico; Zandonà, A.; Toppo, Stefano; Barzon, Luisa; DI CAMILLO, Barbara
Oxidative damage in the progression of chronic liver disease to hepatocellular carcinoma: An intricate pathway.
2014 Cardin, Romilda; Piciocchi, Marika; Bortolami, Marina; Kotsafti, Andromachi; Barzon, Luisa; Lavezzo, Enrico; Sinigaglia, Alessandro; Rodriguez Castro, Ki; Rugge, Massimo; Farinati, Fabio
Reducing bias in RNA sequencing data: a novel approach to compute counts
2014 Finotello, Francesca; Lavezzo, Enrico; Luca, Bianco; Barzon, Luisa; Mazzon, PAOLO EMILIO; Paolo, Fontana; Toppo, Stefano; DI CAMILLO, Barbara
Characterization of human cytomegalovirus microRNA temporal expression profile and target prediction by dynamic expression analysis.
2013 Trevisan, Marta; Carlotta, Albonetti; Lavezzo, Enrico; Sanavia, Tiziana; Alessandro, Sinigaglia; DI CAMILLO, Barbara; Palu', Giorgio; Barzon, Luisa
Characterization of human cytomegalovirus microRNA US25-2-3p.
2013 Carlotta, Albonetti; Trevisan, Marta; Alessandro, Sinigaglia; Lavezzo, Enrico; Giulia, Masi; Barzon, Luisa; Palu', Giorgio
The Complex Epidemiological Scenario of West Nile Virus in Italy
2013 Barzon, Luisa; Pacenti, Monia; Franchin, Elisa; Squarzon, Laura; Lavezzo, Enrico; Cattai, Margherita; Cusinato, Riccardo; Palu', Giorgio
A large-scale evaluation of computational protein function prediction
2013 Predrag, Radivojac; Clark, Wyatt T.; Tal Ronnen Oron, ; Schnoes, Alexandra M.; Tobias, Wittkop; Artem, Sokolov; Kiley, Graim; Christopher, Funk; Karin, Verspoor; Asa Ben Hur, ; Gaurav, Pandey; Yunes, Jeffrey M.; Talwalkar, Ameet S.; Susanna, Repo; Souza, Michael L.; Piovesan, Damiano; Rita, Casadio; Zheng, Wang; Jianlin, Cheng; Hai, Fang; Julian, Gough; Patrik, Koskinen; Petri, Törönen; Jussi Nokso Koivisto, ; Liisa, Holm; Domenico, Cozzetto; Buchan, Daniel W. A.; Kevin, Bryson; Jones, David T.; Bhakti, Limaye; Harshal, Inamdar; Avik, Datta; Manjari, Sunitha K.; Rajendra, Joshi; Meghana, Chitale; Daisuke, Kihara; Lisewski, Andreas M.; Serkan, Erdin; Eric, Venner; Olivier, Lichtarge; Robert, Rentzsch; Haixuan, Yang; Romero, Alfonso E.; Prajwal, Bhat; Alberto, Paccanaro; Tobias, Hamp; Rebecca, Kaßner; Stefan, Seemayer; Esmeralda, Vicedo; Christian, Schaefer; Dominik, Achten; Florian, Auer; Ariane, Boehm; Tatjana, Braun; Maximilian, Hecht; Mark, Heron; Peter, Hönigschmid; Hopf, Thomas A.; Stefanie, Kaufmann; Michael, Kiening; Denis, Krompass; Cedric, Landerer; Yannick, Mahlich; Manfred, Roos; Jari, Björne; Tapio, Salakoski; Andrew, Wong; Hagit, Shatkay; Fanny, Gatzmann; Ingolf, Sommer; Wass, Mark N.; Sternberg, Michael J. E.; Nives, Škunca; Fran, Supek; Matko, Bošnjak; Panče, Panov; Sašo, Džeroski; Tomislav, Šmuc; Kourmpetis, Yiannis A. I.; van Dijk, Aalt D. J.; ter Braak, Cajo J. F.; Yuanpeng, Zhou; Qingtian, Gong; Xinran, Dong; Weidong, Tian; Falda, Marco; Paolo, Fontana; Lavezzo, Enrico; DI CAMILLO, Barbara; Toppo, Stefano; Liang, Lan; Nemanja, Djuric; Yuhong, Guo; Slobodan, Vucetic; Amos, Bairoch; Michal, Linial; Babbitt, Patricia C.; Brenner, Steven E.; Christine, Orengo; Burkhard, Rost; Mooney, Sean D.; Iddo, Friedberg
Genome Sequencing of West Nile Virus from Human Cases in Greece, 2012
2013 Barzon, Luisa; Anna, Papa; Pacenti, Monia; Franchin, Elisa; Lavezzo, Enrico; Squarzon, Laura; Masi, Giulia; Thomas, Martello; Theodolinta, Testa; Cusinato, Riccardo; Palu', Giorgio
Genomic comparative analysis and gene function prediction in infectious diseases: application to the investigation of a meningitis outbreak
2013 Lavezzo, Enrico; Toppo, Stefano; Franchin, Elisa; DI CAMILLO, Barbara; Finotello, Francesca; Falda, Marco; Manganelli, Riccardo; Palu', Giorgio; Barzon, Luisa
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