Monzon, Alexander Miguel
Monzon, Alexander Miguel
Dipartimento di Ingegneria dell'Informazione - DEI
A Novel Splice Variant of Human TGF-β Type II Receptor Encodes a Soluble Protein and Its Fc-Tagged Version Prevents Liver Fibrosis in vivo
2021 Bertolio, Marcela Soledad; La Colla, Anabela; Carrea, Alejandra; Romo, Ana; Canziani, Gabriela; Echarte, Stella Maris; Campisano, Sabrina; Barletta, German Patricio; Monzon, Alexander Miguel; Rodríguez, Tania Melina; Chisari, Andrea Nancy; Dewey, Ricardo Alfredo
Assessing predictors for new post translational modification sites: A case study on hydroxylation
2020 Piovesan, D.; Hatos, A.; Minervini, G.; Quaglia, F.; Monzon, A. M.; Tosatto, S. C. E.
Assessment of patient clinical descriptions and pathogenic variants from gene panel sequences in the CAGI-5 intellectual disability challenge
2019 Carraro, M.; Monzon, A. M.; Chiricosta, Luigi; Reggiani, Francesco; Aspromonte, M. C.; Bellini, M.; Pagel, K.; Jiang, Y.; Radivojac, P.; Kundu, K.; Pal, L. R.; Yin, Y.; Limongelli, I.; Andreoletti, G.; Moult, J.; Wilson, S. J.; Katsonis, P.; Lichtarge, O.; Chen, J.; Wang, Y.; Hu, Z.; Brenner, S. E.; Ferrari, C.; Murgia, A.; Tosatto, S. C. E.; Leonardi, E.
CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure
2022 Escobedo, Nahuel; Tunque Cahui, Ronaldo Romario; Caruso, Gastón; García Ríos, Emilio; Hirsh, Layla; Monzon, Alexander Miguel; Parisi, Gustavo; Palopoli, Nicolas
Conformational diversity analysis reveals three functional mechanisms in proteins
2017 Monzon, Alexander Miguel; Zea, Diego Javier; Fornasari, María Silvina; Saldaño, Tadeo E.; Fernandez Alberti, Sebastian; Tosatto, Silvio; Parisi, Gustavo
Critical assessment of protein intrinsic disorder prediction
2021 Necci, M.; Piovesan, D.; Hoque, M. T.; Walsh, I.; Iqbal, S.; Vendruscolo, M.; Sormanni, P.; Wang, C.; Raimondi, D.; Sharma, R.; Zhou, Y.; Litfin, T.; Galzitskaya, O. V.; Lobanov, M. Y.; Vranken, W.; Wallner, B.; Mirabello, C.; Malhis, N.; Dosztanyi, Z.; Erdos, G.; Meszaros, B.; Gao, J.; Wang, K.; Hu, G.; Wu, Z.; Sharma, A.; Hanson, J.; Paliwal, K.; Callebaut, I.; Bitard-Feildel, T.; Orlando, G.; Peng, Z.; Xu, J.; Wang, S.; Jones, D. T.; Cozzetto, D.; Meng, F.; Yan, J.; Gsponer, J.; Cheng, J.; Wu, T.; Kurgan, L.; Promponas, V. J.; Tamana, S.; Marino-Buslje, C.; Martinez-Perez, E.; Chasapi, A.; Ouzounis, C.; Dunker, A. K.; Kajava, A. V.; Leclercq, J. Y.; Aykac-Fas, B.; Lambrughi, M.; Maiani, E.; Papaleo, E.; Chemes, L. B.; Alvarez, L.; Gonzalez-Foutel, N. S.; Iglesias, V.; Pujols, J.; Ventura, S.; Palopoli, N.; Benitez, G. I.; Parisi, G.; Bassot, C.; Elofsson, A.; Govindarajan, S.; Lamb, J.; Salvatore, M.; Hatos, A.; Monzon, A. M.; Bevilacqua, M.; Micetic, I.; Minervini, G.; Paladin, L.; Quaglia, F.; Leonardi, E.; Davey, N.; Horvath, T.; Kovacs, O. P.; Murvai, N.; Pancsa, R.; Schad, E.; Szabo, B.; Tantos, A.; Macedo-Ribeiro, S.; Manso, J. A.; Pereira, P. J. B.; Davidovic, R.; Veljkovic, N.; Hajdu-Soltesz, B.; Pajkos, M.; Szaniszlo, T.; Guharoy, M.; Lazar, T.; Macossay-Castillo, M.; Tompa, P.; Tosatto, S. C. E.
Databases for intrinsically disordered proteins
2022 Piovesan, Damiano; Monzon, Alexander Miguel; Quaglia, Federica; Tosatto, Silvio C. E.
Disorder transitions and conformational diversity cooperatively modulate biological function in proteins
2016 Zea, Diego Javier; Monzon, Alexander Miguel; Gonzalez, Claudia; Fornasari, María Silvina; Tosatto, Silvio; Parisi, Gustavo
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
2022 Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; Chemes, Lucía B; Pajkos, Mátyás; Lazar, Tamas; Peña-Díaz, Samuel; Santos, Jaime; Ács, Veronika; Farahi, Nazanin; Fichó, Erzsébet; Aspromonte, Maria Cristina; Bassot, Claudio; Chasapi, Anastasia; Davey, Norman E; Davidović, Radoslav; Dobson, Laszlo; Elofsson, Arne; Erdős, Gábor; Gaudet, Pascale; Giglio, Michelle; Glavina, Juliana; Iserte, Javier; Iglesias, Valentín; Kálmán, Zsófia; Lambrughi, Matteo; Leonardi, Emanuela; Longhi, Sonia; Macedo-Ribeiro, Sandra; Maiani, Emiliano; Marchetti, Julia; Marino-Buslje, Cristina; Mészáros, Attila; Monzon, Alexander Miguel; Minervini, Giovanni; Nadendla, Suvarna; Nilsson, Juliet F; Novotný, Marian; Ouzounis, Christos A; Palopoli, Nicolás; Papaleo, Elena; Pereira, Pedro José Barbosa; Pozzati, Gabriele; Promponas, Vasilis J; Pujols, Jordi; Rocha, Alma Carolina Sanchez; Salas, Martin; Sawicki, Luciana Rodriguez; Schad, Eva; Shenoy, Aditi; Szaniszló, Tamás; Tsirigos, Konstantinos D; Veljkovic, Nevena; Parisi, Gustavo; Ventura, Salvador; Dosztányi, Zsuzsanna; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
DisProt: intrinsic protein disorder annotation in 2020
2019 Hatos, András; Hajdu-Soltész, Borbála; Monzon, Alexander M; Palopoli, Nicolas; Álvarez, Lucía; Aykac-Fas, Burcu; Bassot, Claudio; Benítez, Guillermo I; Bevilacqua, Martina; Chasapi, Anastasia; Chemes, Lucia; Davey, Norman E; Davidović, Radoslav; Dunker, A Keith; Elofsson, Arne; Gobeill, Julien; Foutel, Nicolás S González; Sudha, Govindarajan; Guharoy, Mainak; Horvath, Tamas; Iglesias, Valentin; Kajava, Andrey V; Kovacs, Orsolya P; Lamb, John; Lambrughi, Matteo; Lazar, Tamas; Leclercq, Jeremy Y; Leonardi, Emanuela; Macedo-Ribeiro, Sandra; Macossay-Castillo, Mauricio; Maiani, Emiliano; Manso, José A; Marino-Buslje, Cristina; Martínez-Pérez, Elizabeth; Mészáros, Bálint; Mičetić, Ivan; Minervini, Giovanni; Murvai, Nikoletta; Necci, Marco; Ouzounis, Christos A; Pajkos, Mátyás; Paladin, Lisanna; Pancsa, Rita; Papaleo, Elena; Parisi, Gustavo; Pasche, Emilie; Barbosa Pereira, Pedro J; Promponas, Vasilis J; Pujols, Jordi; Quaglia, Federica; Ruch, Patrick; Salvatore, Marco; Schad, Eva; Szabo, Beata; Szaniszló, Tamás; Tamana, Stella; Tantos, Agnes; Veljkovic, Nevena; Ventura, Salvador; Vranken, Wim; Dosztányi, Zsuzsanna; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
Ensembles from Ordered and Disordered Proteins Reveal Similar Structural Constraints during Evolution
2019 Marchetti, Julia; Monzon, Alexander Miguel; Tosatto, Silvio C. E.; Parisi, Gustavo; Fornasari, María Silvina
Experimentally determined long intrinsically disordered protein regions are now abundant in the protein data bank
2020 Monzon, A. M.; Necci, M.; Quaglia, F.; Walsh, I.; Zanotti, G.; Piovesan, D.; Tosatto, S. C. E.
FLIPPER: Predicting and Characterizing Linear Interacting Peptides in the Protein Data Bank
2021 Monzon, A. M.; Bonato, P.; Necci, M.; Tosatto, S. C. E.; Piovesan, D.
FuzDB: a new phase in understanding fuzzy interactions
2022 Hatos, Andras; Monzon, Alexander Miguel; Tosatto, Silvio C E; Piovesan, Damiano; Fuxreiter, Monika
Intrinsic protein disorder and conditional folding in AlphaFoldDB
2022 Piovesan, Damiano; Monzon, Alexander Miguel; Tosatto, Silvio C E
Intrinsically Disordered Protein Ensembles Shape Evolutionary Rates Revealing Conformational Patterns
2021 Palopoli, N.; Marchetti, J.; Monzon, A. M.; Zea, D. J.; Tosatto, S. C. E.; Fornasari, M. S.; Parisi, G.
MobiDB 3.0: More annotations for intrinsic disorder, conformational diversity and interactions in proteins
2018 Piovesan, Damiano; Tabaro, Francesco; Paladin, Lisanna; Necci, Marco; Micetic, Ivan; Camilloni, Carlo; Davey, Norman; Dosztányi, Zsuzsanna; Mészáros, Bálint; Monzon, Alexander M; Parisi, Gustavo; Schad, Eva; Sormanni, Pietro; Tompa, Peter; Vendruscolo, Michele; Vranken, Wim F; Tosatto, Silvio C. E.
MobiDB: 10 years of intrinsically disordered proteins
2023 Piovesan, Damiano; Del Conte, Alessio; Clementel, Damiano; Monzon, Alexander Miguel; Bevilacqua, Martina; Aspromonte, Maria Cristina; Iserte, Javier A; Orti, Fernando E; Marino-Buslje, Cristina; Tosatto, Silvio C E
MobiDB: intrinsically disordered proteins in 2021
2021 Piovesan, Damiano; Necci, Marco; Escobedo, Nahuel; Monzon, Alexander Miguel; Hatos, András; Mičetić, Ivan; Quaglia, Federica; Paladin, Lisanna; Ramasamy, Pathmanaban; Dosztányi, Zsuzsanna; Vranken, Wim F; Davey, Norman E; Parisi, Gustavo; Fuxreiter, Monika; Tosatto, Silvio C E
Molecular Determinants of Selectivity in Disordered Complexes May Shed Light on Specificity in Protein Condensates
2022 Monzon, A. M.; Piovesan, D.; Fuxreiter, M.